Imputing and predicting quantitative genetic interactions in epistatic MAPs
Submitted by Derek Greene on Tue, 2011-05-03 17:29.
Publication Type:
Book ChapterSource:
Network Biology: Methods and Protocols (In Press)Keywords:
bioinformatics; emaps; imputation; kroganAbstract:
<p>Epistatic miniarray profiles (E-MAPs) are a high-throughput approach capable of quantifying aggravating or alleviating genetic interactions between gene pairs. The datasets resulting from E-MAP experiments typically take the form of a symmetric pairwise matrix of interaction scores. These datasets have a significant number of missing values - up to 35% - that can reduce the effectiveness of some data analysis techniques and prevent the use of others.</p>
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